_cahn_hillard | Biharmonic | private |
_cnWeight | Biharmonic | private |
_communicator | libMesh::ParallelObject | protected |
_counts | libMesh::ReferenceCounter | protectedstatic |
_degenerate | Biharmonic | private |
_dim | Biharmonic | private |
_dt | Biharmonic | private |
_dt0 | Biharmonic | private |
_enable_default_ghosting | libMesh::EquationSystems | protected |
_enable_print_counter | libMesh::ReferenceCounter | protectedstatic |
_energy | Biharmonic | private |
_exio | Biharmonic | private |
_growth | Biharmonic | private |
_initialCenter | Biharmonic | private |
_initialState | Biharmonic | private |
_initialWidth | Biharmonic | private |
_jr | Biharmonic | private |
_kappa | Biharmonic | private |
_log_truncation | Biharmonic | private |
_mesh | Biharmonic | private |
_mutex | libMesh::ReferenceCounter | protectedstatic |
_N | Biharmonic | private |
_n_objects | libMesh::ReferenceCounter | protectedstatic |
_netforce | Biharmonic | private |
_o_count | Biharmonic | private |
_o_dt | Biharmonic | private |
_ofile | Biharmonic | private |
_ofile_base | Biharmonic | private |
_refine_in_reinit | libMesh::EquationSystems | protected |
_systems | libMesh::EquationSystems | protected |
_T | Biharmonic | private |
_t0 | Biharmonic | private |
_t1 | Biharmonic | private |
_theta | Biharmonic | private |
_theta_c | Biharmonic | private |
_tol | Biharmonic | private |
_verbose | Biharmonic | private |
add_system(std::string_view system_type, std::string_view name) | libMesh::EquationSystems | virtual |
add_system(std::string_view name) | libMesh::EquationSystems | inline |
adjoint_solve(const QoISet &qoi_indices=QoISet()) | libMesh::EquationSystems | virtual |
allgather() | libMesh::EquationSystems | |
BALL enum value | Biharmonic | |
Biharmonic(ReplicatedMesh &mesh) | Biharmonic | |
build_discontinuous_solution_vector(std::vector< Number > &soln, const std::set< std::string > *system_names=nullptr, const std::vector< std::string > *var_names=nullptr, bool vertices_only=false, bool add_sides=false) const | libMesh::EquationSystems | |
build_elemental_solution_vector(std::vector< Number > &soln, std::vector< std::string > &names) const | libMesh::EquationSystems | |
build_parallel_elemental_solution_vector(std::vector< std::string > &names) const | libMesh::EquationSystems | |
build_parallel_solution_vector(const std::set< std::string > *system_names=nullptr, bool add_sides=false) const | libMesh::EquationSystems | |
build_solution_vector(std::vector< Number > &soln, std::string_view system_name, std::string_view variable_name="all_vars") const | libMesh::EquationSystems | |
build_solution_vector(std::vector< Number > &soln, const std::set< std::string > *system_names=nullptr, bool add_sides=false) const | libMesh::EquationSystems | |
build_variable_names(std::vector< std::string > &var_names, const FEType *type=nullptr, const std::set< std::string > *system_names=nullptr) const | libMesh::EquationSystems | |
clear() | libMesh::EquationSystems | virtual |
comm() const | libMesh::ParallelObject | inline |
compare(const EquationSystems &other_es, const Real threshold, const bool verbose) const | libMesh::EquationSystems | virtual |
Counts typedef | libMesh::ReferenceCounter | protected |
disable_print_counter_info() | libMesh::ReferenceCounter | static |
disable_refine_in_reinit() | libMesh::EquationSystems | inline |
DOUBLE_OBSTACLE enum value | Biharmonic | |
DOUBLE_WELL enum value | Biharmonic | |
dt() | Biharmonic | inline |
dt0() | Biharmonic | inline |
enable_default_ghosting(bool enable) | libMesh::EquationSystems | virtual |
enable_print_counter_info() | libMesh::ReferenceCounter | static |
enable_refine_in_reinit() | libMesh::EquationSystems | inline |
EquationSystems(MeshBase &mesh) | libMesh::EquationSystems | |
find_variable_numbers(std::vector< std::string > &names, const FEType *type=nullptr, const std::vector< FEType > *types=nullptr) const | libMesh::EquationSystems | |
FreeEnergyEnum enum name | Biharmonic | |
get_info() const | libMesh::EquationSystems | virtual |
ReferenceCountedObject< EquationSystems >::get_info() | libMesh::ReferenceCounter | static |
get_mesh() const | libMesh::EquationSystems | inline |
get_mesh() | libMesh::EquationSystems | inline |
get_solution(std::vector< Number > &soln, std::vector< std::string > &names) const | libMesh::EquationSystems | |
get_system(std::string_view name) const | libMesh::EquationSystems | inline |
get_system(std::string_view name) | libMesh::EquationSystems | inline |
get_system(const unsigned int num) const | libMesh::EquationSystems | inline |
get_system(const unsigned int num) | libMesh::EquationSystems | inline |
get_system(std::string_view name) const | libMesh::EquationSystems | inline |
get_system(std::string_view name) | libMesh::EquationSystems | inline |
get_system(const unsigned int num) const | libMesh::EquationSystems | inline |
get_system(const unsigned int num) | libMesh::EquationSystems | inline |
get_vars_active_subdomains(const std::vector< std::string > &names, std::vector< std::set< subdomain_id_type >> &vars_active_subdomains) const | libMesh::EquationSystems | |
has_system(std::string_view name) const | libMesh::EquationSystems | inline |
increment_constructor_count(const std::string &name) noexcept | libMesh::ReferenceCounter | inlineprotected |
increment_destructor_count(const std::string &name) noexcept | libMesh::ReferenceCounter | inlineprotected |
init() | Biharmonic | virtual |
InitialStateEnum enum name | Biharmonic | |
JR class | Biharmonic | friend |
LOG_DOUBLE_OBSTACLE enum value | Biharmonic | |
LOG_DOUBLE_WELL enum value | Biharmonic | |
n_active_dofs() const | libMesh::EquationSystems | |
n_dofs() const | libMesh::EquationSystems | |
n_objects() | libMesh::ReferenceCounter | inlinestatic |
n_processors() const | libMesh::ParallelObject | inline |
n_systems() const | libMesh::EquationSystems | inline |
n_vars() const | libMesh::EquationSystems | |
ReferenceCountedObject< EquationSystems >::operator=(const ReferenceCountedObject &) | libMesh::ReferenceCountedObject< EquationSystems > | inlineprotected |
libMesh::ParallelObject::operator=(const ParallelObject &libmesh_dbg_var(other)) | libMesh::ParallelObject | inline |
output(int timestep, const Real &t, Real &o_t, bool force=false) | Biharmonic | |
ParallelObject(const Parallel::Communicator &comm_in) | libMesh::ParallelObject | inline |
ParallelObject(const ParallelObject &other) | libMesh::ParallelObject | inline |
parameters | libMesh::EquationSystems | |
print_info(std::ostream &os=libMesh::out) const | libMesh::EquationSystems | |
ReferenceCountedObject< EquationSystems >::print_info(std::ostream &out_stream=libMesh::out) | libMesh::ReferenceCounter | static |
processor_id() const | libMesh::ParallelObject | inline |
read(std::string_view name, const XdrMODE, const unsigned int read_flags=(READ_HEADER|READ_DATA), bool partition_agnostic=true) | libMesh::EquationSystems | |
read(std::string_view name, const unsigned int read_flags=(READ_HEADER|READ_DATA), bool partition_agnostic=true) | libMesh::EquationSystems | |
read(Xdr &io, std::function< std::unique_ptr< Xdr >()> &local_io_functor, const unsigned int read_flags=(READ_HEADER|READ_DATA), bool partition_agnostic=true) | libMesh::EquationSystems | |
READ_ADDITIONAL_DATA enum value | libMesh::EquationSystems | |
READ_BASIC_ONLY enum value | libMesh::EquationSystems | |
READ_DATA enum value | libMesh::EquationSystems | |
READ_HEADER enum value | libMesh::EquationSystems | |
READ_LEGACY_FORMAT enum value | libMesh::EquationSystems | |
ReadFlags enum name | libMesh::EquationSystems | |
redundant_added_side(const Elem &elem, unsigned int side) | libMesh::EquationSystems | static |
ReferenceCountedObject() | libMesh::ReferenceCountedObject< EquationSystems > | inlineprotected |
ReferenceCountedObject(const ReferenceCountedObject &other) | libMesh::ReferenceCountedObject< EquationSystems > | inlineprotected |
ReferenceCountedObject(ReferenceCountedObject &&other) noexcept | libMesh::ReferenceCountedObject< EquationSystems > | inlineprotected |
ReferenceCounter() | libMesh::ReferenceCounter | inlineprotected |
ReferenceCounter(const ReferenceCounter &) | libMesh::ReferenceCounter | inlineprotected |
ReferenceCounter(ReferenceCounter &&other) noexcept | libMesh::ReferenceCounter | inlineprotected |
refine_in_reinit_flag() | libMesh::EquationSystems | inline |
reinit() | libMesh::EquationSystems | virtual |
reinit_mesh() | libMesh::EquationSystems | virtual |
reinit_solutions() | libMesh::EquationSystems | |
reinit_systems() | libMesh::EquationSystems | virtual |
ROD enum value | Biharmonic | |
run() | Biharmonic | |
sensitivity_solve(const ParameterVector ¶meters) | libMesh::EquationSystems | virtual |
solve() | libMesh::EquationSystems | virtual |
step(const Real &dt=-1.0) | Biharmonic | |
STRIP enum value | Biharmonic | |
TRY_READ_IFEMS enum value | libMesh::EquationSystems | |
update() | libMesh::EquationSystems | |
verbose() | Biharmonic | inline |
viewParameters() | Biharmonic | |
write(std::string_view name, const XdrMODE, const unsigned int write_flags=(WRITE_DATA), bool partition_agnostic=true) const | libMesh::EquationSystems | |
write(std::string_view name, const unsigned int write_flags=(WRITE_DATA), bool partition_agnostic=true) const | libMesh::EquationSystems | |
write(std::ostream name, const unsigned int write_flags=(WRITE_DATA), bool partition_agnostic=true) const | libMesh::EquationSystems | |
write(Xdr &io, const unsigned int write_flags=(WRITE_DATA), bool partition_agnostic=true, Xdr *const local_io=nullptr) const | libMesh::EquationSystems | |
WRITE_ADDITIONAL_DATA enum value | libMesh::EquationSystems | |
WRITE_DATA enum value | libMesh::EquationSystems | |
WRITE_PARALLEL_FILES enum value | libMesh::EquationSystems | |
WRITE_SERIAL_FILES enum value | libMesh::EquationSystems | |
WriteFlags enum name | libMesh::EquationSystems | |
~Biharmonic() | Biharmonic | inline |
~EquationSystems() | libMesh::EquationSystems | virtual |
~ParallelObject()=default | libMesh::ParallelObject | virtual |
~ReferenceCountedObject() | libMesh::ReferenceCountedObject< EquationSystems > | inline |
~ReferenceCounter() | libMesh::ReferenceCounter | inline |